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  5. Dcu_g20095

Dcu_g20095 (ATATH6, ATH6)


Aliases : ATATH6, ATH6

Description : subfamily ABCA transporter & original description: none


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g20095
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Aev_g01577 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.03 OrthoFinder output from all 47 species
Ceric.18G061500.1 ATATH6, ATH6,... subfamily ABCA transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cre14.g618400 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cre17.g721000 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Solyc03g113040.4.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 702 846
No external refs found!