Dcu_g19417

Description : component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT) activation complex & original description: none

Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g19417

Target	Alias	Description	ECC score	Gene Family Method
AT1G67210	No alias	Proline-rich spliceosome-associated (PSP) family protein...	0.02	OrthoFinder output from all 47 species
Als_g31352	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02041	No alias	component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)...	0.03	OrthoFinder output from all 47 species
Azfi_s0104.g044851	No alias	component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)...	0.03	OrthoFinder output from all 47 species
Ehy_g12214	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g06651	No alias	component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)...	0.03	OrthoFinder output from all 47 species
Mp4g19730.1	No alias	component ZCCHC8 of Nuclear Exosome Targeting (NEXT)...	0.02	OrthoFinder output from all 47 species
Sam_g35280	No alias	component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006568	PSP_pro-rich	389	428

External Links

No external refs found!