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  5. Dcu_g19398

Dcu_g19398


Description : component *(UBN) of HIRA chaperone complex & original description: none


Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19398

Target Alias Description ECC score Gene Family Method Actions
Aob_g03526 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g05762 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66050.1 LOC_Os01g66050 Ubinuclein-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g14320.1 No alias Ubinuclein-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g44164 No alias component *(UBN) of HIRA chaperone complex & original... 0.06 OrthoFinder output from all 47 species
Ore_g44860 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Sam_g13994 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g27050 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Smo440877 No alias Ubinuclein-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g005130.2.1 Solyc11g005130 Ubinuclein-1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e019054_P001 Zm00001e019054 Ubinuclein-1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR014840 HRD 127 168
No external refs found!