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  5. Dcu_g19331

Dcu_g19331


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19331

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g086308 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22689 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53912.t1 Aspi01Gene53912 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61342.t1 Aspi01Gene61342 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010337 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-2394 0.04 OrthoFinder output from all 47 species
Ceric.25G015000.1 Ceric.25G015000 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07512 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07622 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07713 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Ore_g07074 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50970 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016271_P001 Zm00001e016271 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
Zm00001e028426_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 133 237
No external refs found!