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  5. Dcu_g19215

Dcu_g19215


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19215
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT1G63230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g015683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128550 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g18948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.07 OrthoFinder output from all 47 species
Len_g39172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430317g0040 No alias Pentatricopeptide repeat-containing protein At4g11690... 0.04 OrthoFinder output from all 47 species
MA_117731g0010 No alias Pentatricopeptide repeat-containing protein At1g22960,... 0.03 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.05 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.06 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo121322 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 132
IPR002885 Pentatricopeptide_repeat 16 62
IPR002885 Pentatricopeptide_repeat 157 201
No external refs found!