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Aliases : ATCFM2, CFM2
Description : not classified & original description: none
Gene families : OG0001162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00265220 | ATCFM3A, CFM3A,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00028p00245370 | ATCFM2, CFM2,... | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00114550 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00185530 | ATCRS1, CRS1,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01370 | ATCFM2, CFM2 | CRM family member 2 | 0.07 | OrthoFinder output from all 47 species | |
| AT3G18390 | EMB1865 | CRS1 / YhbY (CRM) domain-containing protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G23070 | ATCFM3A, CFM3A | CRM family member 3A | 0.05 | OrthoFinder output from all 47 species | |
| AT4G29750 | No alias | CRS1 / YhbY (CRM) domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022878 | ATCFM3A, CFM3A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059394 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21267 | ATCFM2, CFM2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g25788 | ATCFM2, CFM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g27469 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g06265 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25751 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008527 | ATCFM2, CFM2 | not classified & original description: CDS=155-3025 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11329 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G053300.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50577844... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.23G047600.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50611491... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.31G056300.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50573909... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g20553 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25274 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g12628 | EMB1865 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21472 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008296001 | EMB1865 | CRM-domain containing factor CFM3,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01015193001 | No alias | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032542001 | ATCFM2, CFM2 | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_18303 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37638 | ATCFM3A, CFM3A | CFM2-type plastidial RNA splicing factor. CFM3-type... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g39060.2 | ATCFM2, CFM2,... | CRM-domain containing factor CFM2, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g47850.1 | EMB1865, LOC_Os05g47850 | CRM-domain containing factor CFM3,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g27150.1 | ATCRS1, CRS1,... | CRS1 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g19850.1 | LOC_Os09g19850 | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08834 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55562 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05744 | ATCFM3A, CFM3A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432072g0010 | ATCFM3A, CFM3A | CFM2-type plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435740g0010 | EMB1865 | CFM2-type plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g06280.1 | ATCFM2, CFM2 | CRM-domain containing factor CFM3,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43371 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10122 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17170 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35546 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18629 | ATCFM2, CFM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g46980 | ATCFM3A, CFM3A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g28510 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g52089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo412905 | No alias | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g119450.3.1 | EMB1865, Solyc03g119450 | CRM-domain containing factor CFM3,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g039500.4.1 | Solyc07g039500 | CRM-domain containing factor CFM3,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g083350.3.1 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011272_P001 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e032339_P002 | EMB1865, Zm00001e032339 | CRM-domain containing factor CFM3,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033939_P001 | Zm00001e033939 | CRM-domain containing factor CFM3,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004556 | alpha-amylase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |