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  5. Dcu_g18711

Dcu_g18711


Description : component *(eS12) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18711
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT2G32060 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Adi_g129311 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ala_g12283 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ala_g32040 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Ala_g38702 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g69155 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0161.g054093 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g49008 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.34 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre04.g214503 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g05975 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g27954 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ehy_g03052 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Gb_19269 No alias component RPS12 of SSU proteome 0.07 OrthoFinder output from all 47 species
Gb_38833 No alias component RPS12 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os07g05580.1 LOC_Os07g05580 component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os07g12650.1 LOC_Os07g12650 component RPS12 of SSU proteome 0.05 OrthoFinder output from all 47 species
Len_g54633 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_16920g0010 No alias component RPS12 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Msp_g02615 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c17_3630V3.1 Pp3c17_3630 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species
Ppi_g23142 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g06992 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g34842 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Solyc01g103800.3.1 Solyc01g103800 component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc12g042650.2.1 Solyc12g042650 component RPS12 of SSU proteome 0.05 OrthoFinder output from all 47 species
Spa_g05809 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g22036 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g43206 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e009380_P001 Zm00001e009380 component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 22 115
No external refs found!