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  5. Dcu_g18553

Dcu_g18553


Description : solute transporter *(NIPA) & original description: none


Gene families : OG0000631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18553

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00180p00048820 evm_27.TU.AmTr_v1... Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Als_g19785 No alias solute transporter *(NIPA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G003900.1 Ceric.06G003900 solute transporter *(NIPA) & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g546350 No alias Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022398001 No alias Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os05g35060.1 LOC_Os05g35060 Probable magnesium transporter NIPA3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g17773 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10751 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0189.g025176 No alias solute transporter *(NIPA) & original description: CDS=222-1301 0.03 OrthoFinder output from all 47 species
Solyc11g016940.2.1 Solyc11g016940 Probable magnesium transporter NIPA6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g017380.2.1 Solyc11g017380 Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g18686 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11090 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019060_P002 Zm00001e019060 Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015095 magnesium ion transmembrane transporter activity IEA Interproscan
BP GO:0015693 magnesium ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008521 Mg_trans_NIPA 11 302
No external refs found!