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  5. Dcu_g18248

Dcu_g18248


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.06 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene04981.t1 Aspi01Gene04981 REM-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene24780.t1 Aspi01Gene24780 REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene54333.t1 Aspi01Gene54333 REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0198.g057387 No alias REM-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.16 OrthoFinder output from all 47 species
Ceric.07G043800.1 Ceric.07G043800 REM-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.14G017400.1 Ceric.14G017400 REM-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.35G050300.1 Ceric.35G050300 REM-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.38G010700.1 Ceric.38G010700 REM-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.09 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Len_g01795 No alias REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Len_g55690 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_175090g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.11 OrthoFinder output from all 47 species
Msp_g09553 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08674 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.16 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004736 No alias REM-type transcription factor & original description: CDS=35-988 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018379 No alias REM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.14 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g32723 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 141 231
No external refs found!