Cpa|evm.model.tig00021234.23


Description : 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19. SIN3-like 3 (SNL3)


Gene families : OG_01_0000397 (Gene family) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021234.23
Cluster HCCA cluster: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G24190 SNL3, ATSIN3, SIN3 SIN3-like 3 0.01 Gene family
AT1G27240 No alias Paired amphipathic helix (PAH2) superfamily protein 0.01 Gene family
Cre03.g180800 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.03 Gene family
GSVIVT01020136001 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
LOC_Os01g01960 Os01g0109700 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Smo440352 PACid_15404105 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Solyc02g067570.3.1 Solyc02g067570.3 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Solyc02g087360.3.1 Solyc02g087360.3 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Zm00001d008429 GRMZM2G334457 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Zm00001d040123 GRMZM2G075320 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013194 HDAC_interact_dom 299 388
IPR003822 PAH 26 69
IPR003822 PAH 109 152
No external refs found!