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  5. Dcu_g17436

Dcu_g17436


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17436

Target Alias Description ECC score Gene Family Method Actions
AT1G69580 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.02 OrthoFinder output from all 47 species
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g017665 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g052692 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g125804 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g10988 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05983 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aop_g37611 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55088.t1 Aspi01Gene55088 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007690 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g11638 No alias transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11994 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G015300.1 Ceric.07G015300 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G068700.1 Ceric.10G068700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g30049 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g32284 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011163001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_06138 No alias G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_17437 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g04640.1 LOC_Os02g04640 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g12770.1 LOC_Os09g12770 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g32204 KAN2 KANADI-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_259372g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Nbi_g02075 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g07407 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g09161 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29221 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39083 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g04532 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ppi_g29510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g49915 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc09g072830.4.1 PHL1, Solyc09g072830 PHR1 transcription factor involved in proline synthesis... 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.08 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.09 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Tin_g03896 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e004300_P003 Zm00001e004300 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e009653_P001 Zm00001e009653 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 50 100
IPR025756 Myb_CC_LHEQLE 143 190
No external refs found!