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  5. Dcu_g17312

Dcu_g17312


Description : not classified & original description: none


Gene families : OG0011811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17312

Target Alias Description ECC score Gene Family Method Actions
Aop_g11025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g17094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 248 292
IPR002885 Pentatricopeptide_repeat 144 191
IPR002885 Pentatricopeptide_repeat 816 863
IPR002885 Pentatricopeptide_repeat 447 495
IPR002885 Pentatricopeptide_repeat 613 661
IPR002885 Pentatricopeptide_repeat 346 394
IPR002885 Pentatricopeptide_repeat 513 560
IPR002885 Pentatricopeptide_repeat 715 762
IPR046848 E_motif 935 987
IPR002885 Pentatricopeptide_repeat 688 713
IPR002885 Pentatricopeptide_repeat 890 914
IPR002885 Pentatricopeptide_repeat 220 245
No external refs found!