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  5. Dcu_g17311

Dcu_g17311


Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17311

Target Alias Description ECC score Gene Family Method Actions
AT5G64710 No alias Putative endonuclease or glycosyl hydrolase 0.02 OrthoFinder output from all 47 species
Aob_g04492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61622.t1 EDA32, Aspi01Gene61622 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0141.g051318 No alias not classified & original description: CDS=9-1061 0.03 OrthoFinder output from all 47 species
Ceric.02G082600.1 EDA32, Ceric.02G082600 not classified & original description: pacid=50586080... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06680.2 LOC_Os11g06680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06560.1 LOC_Os12g06560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g101140.4.1 Solyc01g101140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g005440.2.1 Solyc11g005440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 548 608
IPR025605 OST-HTH/LOTUS_dom 673 732
IPR025605 OST-HTH/LOTUS_dom 1038 1098
IPR021139 NYN_MARF1 1 55
IPR025677 OST-HTH-assoc_dom 436 482
No external refs found!