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  5. Dcu_g17078

Dcu_g17078 (ARF16)


Aliases : ARF16

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17078
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT5G60450 ARF4 auxin response factor 4 0.03 OrthoFinder output from all 47 species
Adi_g011925 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084657 ARF19, IAA22, ARF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103241 TIR5, MSG1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02130 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22849 ARF10 ARF-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g07961 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46203.t2 ARF1, Aspi01Gene46203 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46204.t1 ARF1, Aspi01Gene46204 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0005.g009155 ARF6 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026103 ARF6 ARF-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Azfi_s0129.g048848 ARF6 ARF-type transcription factor & original description: CDS=56-2815 0.01 OrthoFinder output from all 47 species
Azfi_s0271.g061201 ARF1 not classified & original description: CDS=77-1246 0.07 OrthoFinder output from all 47 species
Ceric.20G087500.1 ARF1, Ceric.20G087500 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g20944 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19338 ARF16 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g07020 ARF10 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12286 ARF10 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14113 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18587 ARF16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39786 ARF16 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Len_g10088 ARF10 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_134742g0020 ARF6 Auxin response factor 6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g13886 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03505 ARF10 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30468 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g41869 ARF17 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17376 ARF16 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008995 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018261 TIR5, MSG1,... not classified & original description: CDS=484-2670 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018749 ARF10 not classified & original description: CDS=44-817 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025692 ARF10 ARF-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g04406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28812 No alias ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40540 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo117217 ARF6 RNA biosynthesis.transcriptional activation.B3... 0.01 OrthoFinder output from all 47 species
Solyc05g047460.3.1 ARF19, IAA22,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Solyc07g016180.3.1 ARF19, IAA22,... transcription factor (ARF) 0.06 OrthoFinder output from all 47 species
Spa_g29541 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 ARF_dom 397 480
IPR003340 B3_DNA-bd 212 313
No external refs found!