Dcu_g17044 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17044

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00130p00019530 DOT4,... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g128510 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g24237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26670 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67579 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68694 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.05 OrthoFinder output from all 47 species
Cba_g20878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29852 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36324 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g47996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.04 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.05 OrthoFinder output from all 47 species
Ceric.17G035100.1 Ceric.17G035100 not classified & original description: pacid=50618094... 0.05 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.04 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.05 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.04 OrthoFinder output from all 47 species
Ceric.36G017000.1 Ceric.36G017000 not classified & original description: pacid=50569086... 0.04 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.04 OrthoFinder output from all 47 species
Dac_g05615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05661 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08951 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38525 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01018877001 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
GSVIVT01032994001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Len_g04685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08705 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_24849g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Msp_g13478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28101 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g32206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17174 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38344 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05910 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g60900 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc01g102690.4.1 Solyc01g102690 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Solyc11g066920.1.1 CRR28, Solyc11g066920 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Spa_g04477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 141 175
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 97 120
No external refs found!