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Description : not classified & original description: none
Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00050160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00075p00159900 | evm_27.TU.AmTr_v1... | Increased DNA methylation 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00146p00080830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G05380 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G14920 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G36740 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g020053 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g057776 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g08216 | No alias | component *(IDM1) of ROS1-recruitment complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g13062 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g16047 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20182 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g20272 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g23026 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g10962 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13559 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene19628.t1 | Aspi01Gene19628 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene25981.t1 | Aspi01Gene25981 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene53152.t1 | Aspi01Gene53152 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene53154.t1 | Aspi01Gene53154 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010269 | No alias | not classified & original description: CDS=1215-6422 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0519.g075228 | No alias | not classified & original description: CDS=211-3699 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g31776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G075300.1 | Ceric.04G075300 | not classified & original description: pacid=50631416... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.19G070400.1 | Ceric.19G070400 | not classified & original description: pacid=50576012... | 0.05 | OrthoFinder output from all 47 species | |
| Cre08.g386000 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07958 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014219001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01017972001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_06644 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10246 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g53630.1 | LOC_Os03g53630 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g59510.1 | LOC_Os04g59510 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g07690.1 | LOC_Os07g07690 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g47387 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02467 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g06765 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_139275g0010 | No alias | PHD finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| MA_14500g0010 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.08 | OrthoFinder output from all 47 species | |
| Mp6g21090.2 | No alias | PHD finger transcription factor | 0.12 | OrthoFinder output from all 47 species | |
| Ore_g18818 | No alias | component *(IDM1) of ROS1-recruitment complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g25062 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01695 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g06867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18645 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01427 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004313 | No alias | not classified & original description: CDS=588-5219 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g15944 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g005170.3.1 | Solyc03g005170 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g065340.3.1 | Solyc09g065340 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g076010.3.1 | Solyc09g076010 | PHD finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g04858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50990 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g12931 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21039 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001315_P001 | Zm00001e001315 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005667_P001 | Zm00001e005667 | PHD finger transcription factor | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e012046_P003 | Zm00001e012046 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032904_P002 | Zm00001e032904 | PHD finger transcription factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |