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  5. Dcu_g16955

Dcu_g16955


Description : not classified & original description: none


Gene families : OG0010657 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0010657_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16955
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Aob_g40270 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pnu_g09858 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g16130 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g30267 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 908 942
IPR002885 Pentatricopeptide_repeat 386 434
IPR002885 Pentatricopeptide_repeat 791 838
IPR002885 Pentatricopeptide_repeat 285 333
IPR002885 Pentatricopeptide_repeat 588 636
IPR002885 Pentatricopeptide_repeat 689 736
IPR002885 Pentatricopeptide_repeat 184 229
IPR002885 Pentatricopeptide_repeat 487 535
IPR002885 Pentatricopeptide_repeat 765 790
IPR002885 Pentatricopeptide_repeat 865 889
No external refs found!