- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04672 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20781 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05074 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011259 | No alias | not classified & original description: CDS=1-2301 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030532 | No alias | not classified & original description: CDS=1-2100 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0055.g033972 | OTP84 | not classified & original description: CDS=1-2028 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048744 | No alias | not classified & original description: CDS=1-2109 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29689 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29871 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67033 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G024700.1 | Ceric.18G024700 | not classified & original description: pacid=50621916... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G018400.1 | Ceric.28G018400 | not classified & original description: pacid=50571000... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05782 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06799 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07051 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07728 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08274 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08943 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17197 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26819 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40950 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015521001 | No alias | Pentatricopeptide repeat-containing protein At4g32430,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01017996001 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032721001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g12130.1 | EMB2261, LOC_Os05g12130 | RNA editing factor (ECD1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g49920.1 | VAC1, ECB2,... | RNA editing factor (ECB2/VAC1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431227g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20622g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_31170g0010 | CRR22 | RNA editing factor (MEF19) | 0.02 | OrthoFinder output from all 47 species | |
| MA_381817g0020 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_4438g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_94165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9526611g0020 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08941 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12697 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20793 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_4890V3.1 | Pp3c17_4890 | mitochondrial editing factor 22 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g53558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g64055 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003613 | No alias | not classified & original description: CDS=279-3914 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011483 | No alias | not classified & original description: CDS=1-2124 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g09699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020442_P001 | Zm00001e020442 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041048_P001 | OTP86, Zm00001e041048 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 381 | 406 |
| IPR002885 | Pentatricopeptide_repeat | 654 | 678 |
| IPR002885 | Pentatricopeptide_repeat | 452 | 473 |
| IPR002885 | Pentatricopeptide_repeat | 352 | 377 |
| IPR002885 | Pentatricopeptide_repeat | 553 | 576 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 276 |
| IPR002885 | Pentatricopeptide_repeat | 277 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 704 | 762 |
| IPR046848 | E_motif | 797 | 859 |
| IPR002885 | Pentatricopeptide_repeat | 578 | 625 |
| IPR002885 | Pentatricopeptide_repeat | 74 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 477 | 524 |
| IPR002885 | Pentatricopeptide_repeat | 175 | 221 |
| No external refs found! |