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  5. Dcu_g16839

Dcu_g16839


Description : component *(eS7) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16839
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Ala_g21941 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g34320 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g36863 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0028.g023989 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0164.g054279 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021682.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre12.g498900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Gb_33823 No alias component RPS7 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g18570.1 LOC_Os03g18570 component RPS7 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g10576 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_52277g0010 No alias component RPS7 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp6g08120.1 No alias component RPS7 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c20_1360V3.1 Pp3c20_1360 Ribosomal protein S7e family protein 0.01 OrthoFinder output from all 47 species
Pp3c8_22480V3.1 Pp3c8_22480 Ribosomal protein S7e family protein 0.01 OrthoFinder output from all 47 species
Sam_g13288 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g52973 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g43257 No alias component *(eS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e001349_P002 Zm00001e001349 component RPS7 of SSU proteome 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 1 143
No external refs found!