AMTR_s00103p00032160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.13

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.WDR5 component


Gene families : OG_01_0001835 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001835_tree ,
OG_02_0001929 (LandPlants) Phylogenetic Tree(s): OG_02_0001929_tree ,
OG_03_0001958 (SeedPlants) Phylogenetic Tree(s): OG_03_0001958_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00032160
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.02 Archaeplastida
AT3G49660 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
MA_717677g0010 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 LandPlants
Zm00001e005534_P002 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 LandPlants
AT3G49660 No alias Transducin/WD40 repeat-like superfamily protein 0.02 SeedPlants
Zm00001e005534_P002 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 57 92
IPR001680 WD40_repeat 97 134
IPR001680 WD40_repeat 223 264
IPR001680 WD40_repeat 188 219
IPR001680 WD40_repeat 138 176
IPR001680 WD40_repeat 13 50
IPR001680 WD40_repeat 269 307
No external refs found!