Dcu_g15268 (PDF2)


Aliases : PDF2

Description : HD-ZIP IV-type transcription factor & original description: none


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g15268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00089530 HDG5, HB-7,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT4G00730 ANL2, AHDP Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
AT4G04890 PDF2 protodermal factor 2 0.06 OrthoFinder output from all 47 species
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.04 OrthoFinder output from all 47 species
Adi_g006830 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g057101 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110417 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14063 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18649 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25555 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07199 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53005 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62966 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07013 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09754 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17219.t1 PDF2, Aspi01Gene17219 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27628.t1 ATML1, Aspi01Gene27628 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47379.t1 PDF2, Aspi01Gene47379 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57033.t1 ATML1, Aspi01Gene57033 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009667 PDF2 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014154 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026173 PDF2 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0064.g035524 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044331 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063735 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0591.g078757 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06562 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13483 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70526 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G001800.1 PDF2, Ceric.01G001800 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G081500.1 HDG2, Ceric.18G081500 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z007700.1 HDG12, Ceric.1Z007700 not classified & original description: pacid=50637294... 0.05 OrthoFinder output from all 47 species
Ceric.1Z119300.1 HDG2, Ceric.1Z119300 HD-ZIP IV-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.1Z328800.1 HDG2, Ceric.1Z328800 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G046700.1 PDF2, Ceric.38G046700 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g03815 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11376 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20177 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g13320 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15559 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013073001 HDG5, HB-7 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029396001 EDT1, HDG11, ATHDG11 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g55549.1 GL2, LOC_Os01g55549 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
LOC_Os08g08820.2 PDF2, LOC_Os08g08820 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
LOC_Os10g42490.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Lfl_g15698 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10318273g0010 HDG2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_10374232g0010 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_10433688g0010 ATML1 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
MA_122121g0010 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_17048g0010 HDG5, HB-7 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
MA_602026g0020 HDG2 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
MA_8859629g0010 PDF2 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Msp_g14145 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13220 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13790 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34190 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11149 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19174 EDT1, HDG11, ATHDG11 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05300 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08965 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17562 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013927 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026541 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g27182 No alias HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g098200.4.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc06g072310.3.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Solyc08g076370.3.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Spa_g06195 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16174 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46298 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17317 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002453_P001 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e017088_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e034755_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e040312_P001 PDF2, Zm00001e040312 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 97 152
IPR002913 START_lipid-bd_dom 275 497
No external refs found!