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  5. Dcu_g14986

Dcu_g14986 (RABF2B, ATRAB-F2B,...)


Aliases : RABF2B, ATRAB-F2B, RAB-F2B, ATRABF2B, ARA7, ARA-7, ATRAB5B

Description : vesicle tethering small GTPase *(RAB5) & original description: none


Gene families : OG0001928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14986

Target Alias Description ECC score Gene Family Method Actions
Aob_g11756 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G125600.1 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g517400 RABF2B,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Ehy_g26270 RABF2B,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39564 RABF2B,... F-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g13598 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
MA_10435945g0010 RABF2B,... F-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g16229 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e012317_P001 RABF2B,... F-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 171
No external refs found!