Zm00001d049721 (GRMZM2G354618,...)


Aliases : GRMZM2G354618, GRMZM5G812883, GRMZM5G818776

Description : 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family HECATE 3 (HEC3)


Gene families : OG_01_0000523 (Gene family) Phylogenetic Tree(s): OG0000523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d049721
Cluster HCCA cluster: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
LOC_Os06g10820 Os06g0210600 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
LOC_Os08g01700 Os08g0108500 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family
LOC_Os08g36740 Os08g0471401 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
MA_10156436g0010 No alias No description available 0.02 Gene family
MA_83500g0010 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Smo405220 PACid_15411574 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.07 Gene family
Solyc03g044460.1.1 Solyc03g044460.1 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family
Solyc09g005070.1.1 Solyc09g005070.1 No description available 0.02 Gene family
Zm00001d005841 GRMZM2G414252 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.04 Gene family
Zm00001d020705 GRMZM2G045431 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family
Zm00001d043699 GRMZM2G111666 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 168 207
No external refs found!