1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g14309

Dcu_g14309


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G04360 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G42360 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g032305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044123 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g07858 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g30397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01064 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37186.t1 Aspi01Gene37186 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043306 No alias not classified & original description: CDS=1-900 0.03 OrthoFinder output from all 47 species
Cba_g10446 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.09G091200.1 Ceric.09G091200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.09G091300.1 Ceric.09G091300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g10168 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g11681 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g22588 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g36466 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25748 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g29563 ATL2, TL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_02533 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Gb_28973 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11460.1 ATL43, LOC_Os01g11460 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g11480.1 LOC_Os01g11480 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g15020.1 LOC_Os02g15020 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g15060.1 LOC_Os02g15060 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g11860.1 LOC_Os05g11860 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g06150.1 LOC_Os06g06150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g16060.1 LOC_Os06g16060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34530.1 ATL43, LOC_Os06g34530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44950.1 LOC_Os08g44950 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os12g02210.1 LOC_Os12g02210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42540.1 LOC_Os12g42540 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_201391g0010 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.02 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_308999g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_391590g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_41514g0010 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_68992g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_88044g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_98187g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g12835 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g03798 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g06664 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09567 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g30955 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32541 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g43484 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g17673 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g36925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46507 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59969 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g64245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03091 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21782 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g42660 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004696 ATRING1, RING1 not classified & original description: CDS=1-576 0.03 OrthoFinder output from all 47 species
Sam_g37451 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g16818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g54510 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g16305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016092_P001 Zm00001e016092 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023260_P001 Zm00001e023260 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030750_P001 Zm00001e030750 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 74 118
No external refs found!