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  5. Dcu_g14231

Dcu_g14231 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00039700 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.1 OrthoFinder output from all 47 species
AMTR_s00103p00119740 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.12 OrthoFinder output from all 47 species
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.04 OrthoFinder output from all 47 species
Als_g02865 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.13 OrthoFinder output from all 47 species
Als_g04211 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aop_g01106 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.2 OrthoFinder output from all 47 species
Aspi01Gene10906.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.11 OrthoFinder output from all 47 species
Aspi01Gene35684.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.2 OrthoFinder output from all 47 species
Cba_g10610 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Ceric.17G026900.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.24 OrthoFinder output from all 47 species
Dac_g15957 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
GSVIVT01035559001 SYP111, ATSYP111, KN Vesicle trafficking.SNARE target membrane recognition... 0.15 OrthoFinder output from all 47 species
LOC_Os03g52650.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.07 OrthoFinder output from all 47 species
Len_g07593 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Lfl_g23596 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.18 OrthoFinder output from all 47 species
Lfl_g40027 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
MA_132768g0010 ATSYP124, SYP124 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Msp_g11528 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.23 OrthoFinder output from all 47 species
Nbi_g04089 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.27 OrthoFinder output from all 47 species
Ore_g43138 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Ppi_g20351 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016734 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Smo130326 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.1 OrthoFinder output from all 47 species
Solyc06g053760.3.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.09 OrthoFinder output from all 47 species
Spa_g06782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.18 OrthoFinder output from all 47 species
Tin_g11166 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 45 247
IPR000727 T_SNARE_dom 249 300
No external refs found!