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  5. Dcu_g14212

Dcu_g14212


Description : component *(LHCq) of LHC-II complex & original description: none


Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14212
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00112770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G76570 No alias Chlorophyll A-B binding family protein 0.06 OrthoFinder output from all 47 species
Aev_g00780 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20424 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.10G013700.1 Ceric.10G013700 component *(LHCq) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01013450001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Gb_21134 No alias Chlorophyll a-b binding protein 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os09g12540.1 LOC_Os09g12540 component LHCq of LHC-II complex 0.04 OrthoFinder output from all 47 species
Len_g11645 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10372 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02997 No alias component *(LHCq) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g00398 No alias component *(LHCq) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g08686 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02034 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Smo104804 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Spa_g05023 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033739_P001 Zm00001e033739 component LHCq of LHC-II complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 131 306
No external refs found!