Dcu_g14175 (COL2, ATCOL2)

Aliases : COL2, ATCOL2

Description : floral promoter *(CONSTANS) & original description: none

Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g14175

Target	Alias	Description	ECC score	Gene Family Method
AT5G24930	ATCOL4, COL4	CONSTANS-like 4	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009656	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: CDS=186-1232	0.02	OrthoFinder output from all 47 species
Ceric.20G041500.1	ATCOL4, COL4,...	floral promoter *(CONSTANS) & original description:...	0.05	OrthoFinder output from all 47 species
Zm00001e013804_P001	ATCOL5, COL5,...	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e037706_P002	ATCOL5, COL5,...	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	359	401
IPR000315	Znf_B-box	52	93
IPR000315	Znf_B-box	94	138

External Links

No external refs found!