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  5. Dcu_g13939

Dcu_g13939


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13939

Target Alias Description ECC score Gene Family Method Actions
Adi_g020466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.03 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.03 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000171001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33604 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g04963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026441 No alias not classified & original description: CDS=224-2032 0.03 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 201 496
No external refs found!