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  5. Dcu_g13818

Dcu_g13818 (PTAC10, PDE312)


Aliases : PTAC10, PDE312

Description : cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) & original description: none


Gene families : OG0006411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13818
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT3G48500 PTAC10, PDE312 Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
Aop_g07043 PTAC10, PDE312 cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.03 OrthoFinder output from all 47 species
Cba_g04661 PTAC10, PDE312 cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.03 OrthoFinder output from all 47 species
Ceric.02G035300.1 PTAC10, PDE312,... cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.05 OrthoFinder output from all 47 species
LOC_Os01g67570.1 PTAC10, PDE312,... PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
MA_10428299g0010 PTAC10, PDE312 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435142g0010 PTAC10, PDE312 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_14025g0020 PTAC10, PDE312 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Nbi_g28130 PTAC10, PDE312 cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.03 OrthoFinder output from all 47 species
Ppi_g15491 PTAC10, PDE312 cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.02 OrthoFinder output from all 47 species
Sam_g49470 No alias cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... 0.02 OrthoFinder output from all 47 species
Smo438805 PTAC10, PDE312 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
Solyc03g111050.3.1 PTAC10, PDE312,... PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Zm00001e028549_P001 PTAC10, PDE312,... PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!