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  5. Dcu_g13526

Dcu_g13526 (LSF1)


Aliases : LSF1

Description : alpha-amylase-binding scaffold protein *(LSF1) & original description: none


Gene families : OG0007733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007733_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13526
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00193720 LSF1,... Protein modification.dephosphorylation.tyrosine protein... 0.03 OrthoFinder output from all 47 species
Adi_g114259 LSF1 alpha-amylase-binding scaffold protein *(LSF1) &... 0.02 OrthoFinder output from all 47 species
Len_g09726 LSF1 alpha-amylase-binding scaffold protein *(LSF1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
BP GO:0016311 dephosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 547 629
IPR000340 Dual-sp_phosphatase_cat-dom 402 513
No external refs found!