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  5. Dcu_g13467

Dcu_g13467 (AGO1)


Aliases : AGO1

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dcu_g13467

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269950 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AT1G69440 AGO7, ZIP Argonaute family protein 0.02 OrthoFinder output from all 47 species
Aev_g02523 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29359 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g03218 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Msp_g27281 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Zm00001e036986_P001 AGO1, Zm00001e036986 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR014811 ArgoL1 430 478
IPR003100 PAZ_dom 505 604
IPR032474 Argonaute_N 283 419
IPR003165 Piwi 777 1076
IPR032472 ArgoL2 617 664
No external refs found!