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  5. Dcu_g13384

Dcu_g13384 (FIP1[V], ATFIP1[V],...)


Aliases : FIP1[V], ATFIP1[V], FIPS5, ATFIPS5

Description : component *(Fip1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none


Gene families : OG0001918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001918_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13384
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Ala_g13981 FIP1[V],... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19308 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Aob_g26393 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
Aob_g32010 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.06 OrthoFinder output from all 47 species
Ceric.31G051000.1 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
Dac_g10619 FIP1[V],... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24035 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ehy_g16877 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ehy_g18049 FIP1[V],... not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g19570.1 FIP1[V],... FIP1[V]-like protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g17376 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Lfl_g24352 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
MA_101689g0010 FIP1[V],... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_11233g0040 No alias FIP1[V]-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_140047g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g14310.1 FIP1[V],... component Fip1 of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ore_g17396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43037 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Pir_g30495 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Ppi_g03287 FIP1[V],... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g005320.3.1 FIP1[V],... component Fip1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Solyc12g099280.2.1 FIP1[V],... FIP1[V]-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g09513 FIP1[V],... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001458_P002 FIP1[V],... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007854 Fip1_dom 392 434
No external refs found!