1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g13224

Dcu_g13224


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13224

Target Alias Description ECC score Gene Family Method Actions
Als_g62437 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42284.t1 ZFN1, Aspi01Gene42284 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01688 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pir_g01009 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12395 ZFN3 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g23326 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32665 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ppi_g29535 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016888 HUA1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Sam_g48703 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc06g054600.2.1 Solyc06g054600 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 382 406
IPR000571 Znf_CCCH 123 148
IPR000571 Znf_CCCH 336 361
IPR000571 Znf_CCCH 79 102
IPR000571 Znf_CCCH 170 195
No external refs found!