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  5. Dcu_g13030

Dcu_g13030


Description : not classified & original description: none


Gene families : OG0005251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13030

Target Alias Description ECC score Gene Family Method Actions
AT5G17270 No alias Protein prenylyltransferase superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g07478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G028400.1 Ceric.32G028400 not classified & original description: pacid=50598293... 0.04 OrthoFinder output from all 47 species
Cre09.g401700 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g17156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g12550.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!