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  5. Dcu_g12907

Dcu_g12907 (CML42)


Aliases : CML42

Description : calcium sensor *(CML) & original description: none


Gene families : OG0002443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12907
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g022558 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109939 CPK26, ATCPK26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69683 ATCML9, CAM9, CML9 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14127.t1 UNE14, Aspi01Gene14127 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G088200.1 CML42, Ceric.11G088200 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G088500.1 CML42, Ceric.11G088500 calcium sensor *(CML) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.11G088700.1 CML42, Ceric.11G088700 calcium sensor *(CML) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.11G089100.1 CML43, Ceric.11G089100 not classified & original description: pacid=50595630... 0.05 OrthoFinder output from all 47 species
Ceric.11G089400.1 Ceric.11G089400 calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.11G089600.1 Ceric.11G089600 calcium sensor *(CML) & original description:... 0.08 OrthoFinder output from all 47 species
Dde_g12988 CML42 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g36107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21665 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15423 AGD11 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60692 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007058 CML42 calcium sensor *(CML) & original description: CDS=1-537 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 71 137
No external refs found!