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  5. Dcu_g12869

Dcu_g12869


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12869

Target Alias Description ECC score Gene Family Method Actions
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g058574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082153 FTSH12, EMB36,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012762001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
Gb_14945 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10425865g0020 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10430440g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_12346g0030 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
MA_146875g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Nbi_g43970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c10_20790V3.1 Pp3c10_20790 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Pp3c20_22230V3.1 Pp3c20_22230 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc07g052780.3.1 Solyc07g052780 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Spa_g51896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 231 471
IPR000157 TIR_dom 48 221
IPR001611 Leu-rich_rpt 673 695
No external refs found!