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  5. Dcu_g12598

Dcu_g12598


Description : stability factor *(PPR10) & original description: none


Gene families : OG0006045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12598

Target Alias Description ECC score Gene Family Method Actions
Ala_g06016 No alias stability factor *(PPR10) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24126 No alias stability factor *(PPR10) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02296 No alias stability factor *(PPR10) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029248001 No alias Pentatricopeptide repeat-containing protein At2g18940,... 0.04 OrthoFinder output from all 47 species
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.05 OrthoFinder output from all 47 species
MA_417755g0010 No alias plastidial mRNA processing factor (PPR10) 0.03 OrthoFinder output from all 47 species
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 OrthoFinder output from all 47 species
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.02 OrthoFinder output from all 47 species
Pnu_g08569 No alias stability factor *(PPR10) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17870 No alias stability factor *(PPR10) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13568 No alias stability factor *(PPR10) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g107320.3.1 Solyc01g107320 plastidial mRNA processing factor (PPR10) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 555 604
IPR002885 Pentatricopeptide_repeat 730 778
IPR002885 Pentatricopeptide_repeat 485 532
IPR002885 Pentatricopeptide_repeat 653 709
IPR002885 Pentatricopeptide_repeat 360 393
IPR002885 Pentatricopeptide_repeat 406 463
IPR002885 Pentatricopeptide_repeat 299 359
IPR002885 Pentatricopeptide_repeat 228 289
IPR002885 Pentatricopeptide_repeat 804 831
No external refs found!