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  5. Dcu_g12405

Dcu_g12405


Description : E3 ubiquitin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12405

Target Alias Description ECC score Gene Family Method Actions
Als_g13446 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62084 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11094 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04740.t1 Aspi01Gene04740 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26787.t1 Aspi01Gene26787 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26788.t1 Aspi01Gene26788 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G023900.1 Ceric.06G023900 E3 ubiquitin ligase *(RGLG) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.06G037200.1 RGLG2, Ceric.06G037200 E3 ubiquitin ligase *(RGLG) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z003900.1 RGLG1, Ceric.1Z003900 E3 ubiquitin ligase *(RGLG) & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g01458 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000570001 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01002586001 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Len_g05252 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36072 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07278 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13675 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25618 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30852 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06814 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08521 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52372 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053870.3.1 Solyc05g053870 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 OrthoFinder output from all 47 species
Spa_g55605 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27493 RGLG1 E3 ubiquiTin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 54 266
No external refs found!