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  5. AMTR_s00102p00095780

AMTR_s00102p00095780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00102.50

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit


Gene families : OG_01_0004656 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004656_tree ,
OG_02_0005385 (LandPlants) Phylogenetic Tree(s): OG_02_0005385_tree ,
OG_03_0007627 (SeedPlants) Phylogenetic Tree(s): OG_03_0007627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00095780
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT4G23460 No alias Adaptin family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 Archaeplastida
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 Archaeplastida
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_83634g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 Archaeplastida
Pp3c14_2460V3.1 No alias Adaptin family protein 0.04 Archaeplastida
Pp3c1_19340V3.1 No alias Adaptin family protein 0.08 Archaeplastida
Pp3c2_18140V3.1 No alias Adaptin family protein 0.05 Archaeplastida
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 Archaeplastida
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 Archaeplastida
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.1 Archaeplastida
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 Archaeplastida
AT4G23460 No alias Adaptin family protein 0.04 LandPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 LandPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 LandPlants
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 LandPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 LandPlants
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.02 LandPlants
MA_83634g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 LandPlants
Pp3c14_2460V3.1 No alias Adaptin family protein 0.04 LandPlants
Pp3c1_19340V3.1 No alias Adaptin family protein 0.06 LandPlants
Pp3c2_18140V3.1 No alias Adaptin family protein 0.05 LandPlants
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 LandPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 LandPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.1 LandPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 LandPlants
AT4G23460 No alias Adaptin family protein 0.04 SeedPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 SeedPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 SeedPlants
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 SeedPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 SeedPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 SeedPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.1 SeedPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 16 533
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 676 774
IPR015151 B-adaptin_app_sub_C 789 900
No external refs found!