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  5. Dcu_g12386

Dcu_g12386 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12386

Target Alias Description ECC score Gene Family Method Actions
Aop_g09905 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06356.t1 HTA6, Aspi01Gene06356 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10197.t1 RAT5, HTA1,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23033.t1 HTA6, Aspi01Gene23033 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78608 HTA2 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder output from all 47 species
LOC_Os05g38640.1 HTA12, LOC_Os05g38640 histone (H2A) 0.05 OrthoFinder output from all 47 species
Mp3g02370.1 HTA13 histone (H2A) 0.02 OrthoFinder output from all 47 species
Mp4g21750.1 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Ore_g07187 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05881 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62733 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025887 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-531 0.06 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 143 174
IPR007125 Histone_H2A/H2B/H3 61 140
No external refs found!