Dcu_g12329


Description : not classified & original description: none


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12329
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.03 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.06 OrthoFinder output from all 47 species
Cre10.g446350 No alias PsbP domain-containing protein 3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g10040.1 No alias PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.04 OrthoFinder output from all 47 species
Sam_g22535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 84 242
No external refs found!