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  5. Dcu_g12181

Dcu_g12181 (TRXF2, ATF2)


Aliases : TRXF2, ATF2

Description : not classified & original description: none


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12181
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00119540 ATF1, TRXF1,... Redox homeostasis.chloroplast redox homeostasis.F-type... 0.03 OrthoFinder output from all 47 species
Adi_g003203 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102129 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g03766 ATF1, TRXF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06364 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02991 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g00422 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07635 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s2245.g109976 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: CDS=10-579 0.04 OrthoFinder output from all 47 species
Cba_g12466 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.37G049100.1 ATHM4, TRX-M4,... not classified & original description: pacid=50616292... 0.05 OrthoFinder output from all 47 species
Cre01.g066552 ATTRX1, ATTRX H1, TRX1 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.01 OrthoFinder output from all 47 species
Dac_g09180 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019070001 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.04 OrthoFinder output from all 47 species
Gb_20154 ATF1, TRXF1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g18423 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g21742 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30428 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11575 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.05 OrthoFinder output from all 47 species
MA_29361g0010 TRXF2, ATF2 F-type thioredoxin 0.04 OrthoFinder output from all 47 species
MA_5229g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g20740.1 ATF1, TRXF1 F-type thioredoxin 0.05 OrthoFinder output from all 47 species
Mp3g08490.1 ATF1, TRXF1 F-type thioredoxin 0.08 OrthoFinder output from all 47 species
Msp_g29081 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02641 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30576 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022310 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: CDS=118-813 0.04 OrthoFinder output from all 47 species
Sam_g15284 No alias F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g056300.4.1 ATF1, TRXF1,... F-type thioredoxin 0.02 OrthoFinder output from all 47 species
Spa_g30029 ACHT3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51722 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21213 TRXF2, ATF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027512_P002 TRXF2, ATF2,... F-type thioredoxin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 96 142
No external refs found!