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  5. Dcu_g12042

Dcu_g12042 (PUB44, SAUL1, ATPUB44)


Aliases : PUB44, SAUL1, ATPUB44

Description : E3 ubiquitin ligase *(SAUL) & original description: none


Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12042
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00044540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g15318 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17662 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g00798 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010890 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=175-3234 0.03 OrthoFinder output from all 47 species
Cba_g16170 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G001500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G008100.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G068400.1 PUB26, Ceric.13G068400 E3 ubiquitin ligase *(SAUL) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.25G052400.1 Ceric.25G052400 E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09678 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00947 PUB9, ATPUB9 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018088001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72000.1 LOC_Os01g72000 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Len_g09054 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_703456g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g08920.1 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Mp1g26780.1 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g14552 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17308 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17415 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17502 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32045 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006961 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=34-3165 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025808 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=139-3045 0.03 OrthoFinder output from all 47 species
Sam_g27901 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068490.4.1 Solyc01g068490 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc01g096200.4.1 Solyc01g096200 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc03g082690.3.1 Solyc03g082690 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Tin_g12195 No alias E3 ubiquiTin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13174 PUB44, SAUL1, ATPUB44 E3 ubiquiTin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018652_P001 Zm00001e018652 E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 259 325
No external refs found!