Dcu_g12020


Description : not classified & original description: none


Gene families : OG0004660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004660_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12020

Target Alias Description ECC score Gene Family Method Actions
AT1G13160 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g09894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G033500.1 Ceric.37G033500 not classified & original description: pacid=50616272... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.36 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre06.g277050 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01000585001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_20290 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g53770.1 LOC_Os04g53770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g34886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1537g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_29597g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g17670.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113277 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc12g099890.2.1 Solyc12g099890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006853_P001 Zm00001e006853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007949 SDA1_C 429 856
IPR012977 SDA1_N 71 122
No external refs found!