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  5. Dcu_g11674

Dcu_g11674 (emb1703)


Aliases : emb1703

Description : not classified & original description: none


Gene families : OG0007932 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007932_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g11674
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Ala_g03989 emb1703 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g17073 emb1703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08269 emb1703 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10075 emb1703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19797 emb1703 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_171750g0010 emb1703 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g35551 emb1703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026696 emb1703 not classified & original description: CDS=1-1242 0.03 OrthoFinder output from all 47 species
Solyc01g096010.4.1 emb1703, Solyc01g096010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021503 DUF3110 1051 1132
No external refs found!