Dcu_g11332

Description : translation elongation factor *(EF-P) & original description: none

Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g11332

Target	Alias	Description	ECC score	Gene Family Method
AT3G08740	No alias	elongation factor P (EF-P) family protein	0.04	OrthoFinder output from all 47 species
Adi_g010197	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Ala_g04273	No alias	translation elongation factor *(EF-P) & original...	0.07	OrthoFinder output from all 47 species
Azfi_s0359.g066840	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Cba_g38579	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Ceric.24G041300.1	Ceric.24G041300	translation elongation factor *(EF-P) & original...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000404.33	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dde_g00267	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g00568	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01030181001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
LOC_Os11g02450.1	LOC_Os11g02450	EF-P translation elongation factor	0.03	OrthoFinder output from all 47 species
LOC_Os12g02380.1	LOC_Os12g02380	EF-P translation elongation factor	0.03	OrthoFinder output from all 47 species
Len_g01053	No alias	translation elongation factor *(EF-P) & original...	0.04	OrthoFinder output from all 47 species
Mp4g02120.1	No alias	EF-P translation elongation factor	0.04	OrthoFinder output from all 47 species
Sam_g14867	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Solyc10g075020.3.1	Solyc10g075020	EF-P translation elongation factor	0.03	OrthoFinder output from all 47 species
Spa_g11669	No alias	translation elongation factor *(EF-P) & original...	0.05	OrthoFinder output from all 47 species
Zm00001e039313_P003	Zm00001e039313	EF-P translation elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015365	Elong-fact-P_C	171	226
IPR001059	Transl_elong_P/YeiP_cen	113	163
IPR013185	Transl_elong_KOW-like	45	102

External Links

No external refs found!

Dcu_g11332

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation