1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g10942

Dcu_g10942 (NFD03, HMGB3, NFD3)


Aliases : NFD03, HMGB3, NFD3

Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10942

Target Alias Description ECC score Gene Family Method Actions
Als_g06156 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000553.19 NFD03, HMGB3, NFD3 FACT complex subunit SSRP1 OS=Vicia faba 0.01 OrthoFinder output from all 47 species
Cre11.g481050 ATHMG, HMG, SSRP1, NFD FACT complex subunit SSRP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034361001 HMGB6 High mobility group B protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05796 NFD2, HMG BETA... High mobility group B protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_86565g0010 HMGB6 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g07450.1 NFD03, HMGB3, NFD3 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g06088 HMGB6 DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Ore_g14393 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Smo73858 No alias High mobility group B protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 49 118
No external refs found!