Zm00001d049260 (GRMZM2G142030)


Aliases : GRMZM2G142030

Description : 11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)


Gene families : OG_01_0001567 (Gene family) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d049260
Cluster HCCA cluster: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Cre04.g230144 No alias 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.03 Gene family
LOC_Os11g31640 Os11g0516000 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.02 Gene family
MA_10853g0020 No alias 11.8.1.2 lipid metabolism.exotics (steroids, squalene... 0.01 Gene family

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 100 460
No external refs found!