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  5. Dcu_g10536

Dcu_g10536


Description : E3 ubiquitin ligase *(DRR1) & original description: none


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10536

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00183390 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT4G26580 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g21445 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21889 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18426.t1 Aspi01Gene18426 E3 ubiquitin ligase *(DRR1) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene45051.t1 Aspi01Gene45051 E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08695 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03890 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g015800.2.1 Solyc12g015800 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Tin_g13870 No alias E3 ubiquiTin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020043_P002 Zm00001e020043 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 164 205
No external refs found!