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  5. Dcu_g10513

Dcu_g10513 (SPL1)


Aliases : SPL1

Description : SBP-type transcription factor & original description: none


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10513

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00076020 SPL1,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Als_g07275 SPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15978 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g12284 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17700 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33491 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028208001 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Len_g30162 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50902 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08894 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09606 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13310 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27878 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 197 270
No external refs found!